| Staphylococcus aureus host interactions and adaptation BP Howden, SG Giulieri, T Wong Fok Lung, SL Baines, LK Sharkey, ... Nature Reviews Microbiology 21 (6), 380-395, 2023 | 722 | 2023 |
| Co-circulation of Multidrug-resistant Shigella Among Men Who Have Sex With Men in Australia DJ Ingle, M Easton, M Valcanis, T Seemann, JC Kwong, N Stephens, ... Clinical Infectious Diseases 69 (9), 1535-1544, 2019 | 123 | 2019 |
| Population genomics and antimicrobial resistance in Corynebacterium diphtheriae M Hennart, LG Panunzi, C Rodrigues, Q Gaday, SL Baines, ... Genome Medicine 12 (1), 107, 2020 | 102 | 2020 |
| Evolutionary dynamics of multidrug resistant Salmonella enterica serovar 4,[5],12:i:- in Australia DJ Ingle, RL Ambrose, SL Baines, S Duchene, A Gonçalves da Silva, ... Nature Communications 12 (1), 4786, 2021 | 85 | 2021 |
| Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus SL Baines, KE Holt, MB Schultz, T Seemann, BO Howden, SO Jensen, ... MBio 6 (2), 10.1128/mbio. 00080-15, 2015 | 83 | 2015 |
| Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak JC Kwong, CR Lane, F Romanes, AG da Silva, M Easton, K Cronin, ... PeerJ 6, e4210, 2018 | 78 | 2018 |
| Rapid Emergence and Evolution of Staphylococcus aureus Clones Harboring fusC-Containing Staphylococcal Cassette Chromosome Elements SL Baines, BP Howden, H Heffernan, TP Stinear, GP Carter, T Seemann, ... Antimicrobial agents and chemotherapy 60 (4), 2359-2365, 2016 | 65 | 2016 |
| Emergence of endemic MLST non-typeable vancomycin-resistant Enterococcus faecium GP Carter, AH Buultjens, SA Ballard, SL Baines, T Tomita, J Strachan, ... Journal of Antimicrobial Chemotherapy 71 (12), 3367-3371, 2016 | 64 | 2016 |
| Genomic exploration of sequential clinical isolates reveals a distinctive molecular signature of persistent Staphylococcus aureus bacteraemia SG Giulieri, SL Baines, R Guerillot, T Seemann, A Gonçalves da Silva, ... Genome medicine 10 (1), 65, 2018 | 62 | 2018 |
| Genomic analysis of multiresistant Staphylococcus capitis associated with neonatal sepsis GP Carter, JE Ussher, AG Da Silva, SL Baines, H Heffernan, TV Riley, ... Antimicrobial agents and chemotherapy 62 (11), 10.1128/aac. 00898-18, 2018 | 61 | 2018 |
| Integrative omics identifies conserved and pathogen-specific responses of sepsis-causing bacteria A Mu, WP Klare, SL Baines, CN Ignatius Pang, R Guérillot, ... Nature communications 14 (1), 1530, 2023 | 57 | 2023 |
| The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study RS Lee, A Gonçalves da Silva, SL Baines, J Strachan, S Ballard, ... Journal of Antimicrobial Chemotherapy 73 (12), 3268-3278, 2018 | 47 | 2018 |
| Genomic Insights into a Sustained National Outbreak of Yersinia pseudotuberculosis DA Williamson, SL Baines, GP Carter, AG Da Silva, X Ren, J Sherwood, ... Genome Biology and Evolution 8 (12), 3806-3814, 2016 | 46 | 2016 |
| Heterogeneity of genetic pathways toward daptomycin nonsusceptibility in Staphylococcus aureus determined by adjunctive antibiotics AD Berti, SL Baines, BP Howden, G Sakoulas, V Nizet, RA Proctor, ... Antimicrobial agents and chemotherapy 59 (5), 2799-2806, 2015 | 44 | 2015 |
| Topical antibiotic use coselects for the carriage of mobile genetic elements conferring resistance to unrelated antimicrobials in Staphylococcus aureus GP Carter, MB Schultz, SL Baines, A Gonçalves da Silva, H Heffernan, ... Antimicrobial agents and chemotherapy 62 (2), 10.1128/aac. 02000-17, 2018 | 40 | 2018 |
| Comprehensive genomic investigation of adaptive mutations driving the low-level oxacillin resistance phenotype in Staphylococcus aureus SG Giulieri, R Guérillot, JC Kwong, IR Monk, AS Hayes, D Daniel, ... MBio 11 (6), 10.1128/mbio. 02882-20, 2020 | 39 | 2020 |
| Evolution of daptomycin resistance in coagulase-negative staphylococci involves mutations of the essential two-component regulator WalKR JH Jiang, C Dexter, DR Cameron, IR Monk, SL Baines, IJ Abbott, ... Antimicrobial agents and chemotherapy 63 (3), 10.1128/aac. 01926-18, 2019 | 38 | 2019 |
| A phylogenomic framework for assessing the global emergence and evolution of clonal complex 398 methicillin-resistant Staphylococcus aureus A Gonçalves da Silva, SL Baines, GP Carter, H Heffernan, NP French, ... Microbial Genomics 3 (1), mgen000105, 2017 | 38 | 2017 |
| Daptomycin selects for genetic and phenotypic adaptations leading to antibiotic tolerance in MRSA AD Berti, N Shukla, AD Rottier, JS McCrone, HM Turner, IR Monk, ... Journal of Antimicrobial Chemotherapy 73 (8), 2030-2033, 2018 | 36 | 2018 |
| Genomic analysis of ST88 community-acquired methicillin resistant Staphylococcus aureus in Ghana G Kpeli, AH Buultjens, S Giulieri, E Owusu-Mireku, SY Aboagye, ... PeerJ 5, e3047, 2017 | 36 | 2017 |
Benjamin HowdenProfessor and Director, Microbiological Diagnostic Unit, University of Melbourne at The DohertyVerified email at unimelb.edu.au
