| The permeability enhancing mechanism of DMSO in ceramide bilayers simulated by molecular dynamics R Notman, WK den Otter, MG Noro, WJ Briels, J Anwar Biophysical journal 93 (6), 2056-2068, 2007 | 266 | 2007 |
| The calculation of free-energy differences by constrained molecular-dynamics simulations WK den Otter, WJ Briels The Journal of chemical physics 109 (11), 4139-4146, 1998 | 243 | 1998 |
| Free energy of a trans-membrane pore calculated from atomistic molecular dynamics simulations J Wohlert, WK den Otter, O Edholm, WJ Briels The Journal of chemical physics 124 (15), 154905, 2006 | 195 | 2006 |
| Granular mixing and segregation in a horizontal rotating drum: a simulation study on the impact of rotational speed and fill level M Arntz, WK den Otter, WJ Briels, PJT Bussmann, HH Beeftink, RM Boom AIChE journal 54 (12), 3133-3146, 2008 | 190 | 2008 |
| Intermonolayer friction and surface shear viscosity of lipid bilayer membranes WK den Otter, SA Shkulipa Biophysical journal 93 (2), 423-433, 2007 | 184 | 2007 |
| Simulations of stable pores in membranes: system size dependence and line tension TV Tolpekina, WK den Otter, WJ Briels The Journal of chemical physics 121 (16), 8014-8020, 2004 | 157 | 2004 |
| Nucleation free energy of pore formation in an amphiphilic bilayer studied by molecular dynamics simulations TV Tolpekina, WK den Otter, WJ Briels The Journal of chemical physics 121 (23), 12060-12066, 2004 | 145 | 2004 |
| Fast, flexible particle simulations—An introduction to MercuryDPM T Weinhart, L Orefice, M Post, MP van Schrojenstein Lantman, ... Computer physics communications 249, 107129, 2020 | 142 | 2020 |
| Thermodynamic integration of the free energy along a reaction coordinate in Cartesian coordinates WK den Otter The Journal of Chemical Physics 112 (17), 7283-7292, 2000 | 127 | 2000 |
| Segregation of granular particles by mass, radius, and density in a horizontal rotating drum M Arntz, HH Beeftink, WK den Otter, WJ Briels, RM Boom AIChE journal 60 (1), 50-59, 2014 | 108 | 2014 |
| Liquid–crystalline ordering in rod—coil diblock copolymers studied by mesoscale simulations A AlSunaidi, WK den Otter, JHR Clarke Philosophical Transactions of the Royal Society of London. Series A …, 2004 | 105 | 2004 |
| Free energy from molecular dynamics with multiple constraints WK den Otter, WJ Briels Molecular physics 98 (12), 773-781, 2000 | 104 | 2000 |
| The bending rigidity of an amphiphilic bilayer from equilibrium and nonequilibrium molecular dynamics WK den Otter, WJ Briels The Journal of chemical physics 118 (10), 4712-4720, 2003 | 101 | 2003 |
| The generation of curved clathrin coats from flat plaques WK den Otter, WJ Briels Traffic 12 (10), 1407-1416, 2011 | 84 | 2011 |
| Brownian dynamics simulations of the self-and collective rotational diffusion coefficients of rigid long thin rods YG Tao, WK den Otter, JT Padding, JKG Dhont, WJ Briels The Journal of chemical physics 122 (24), 244903, 2005 | 84 | 2005 |
| Isotropic-nematic spinodals of rigid long thin rodlike colloids by event-driven Brownian dynamics simulations YG Tao, WK den Otter, JKG Dhont, WJ Briels The Journal of chemical physics 124 (13), 134906, 2006 | 78 | 2006 |
| Surface viscosity, diffusion, and intermonolayer friction: simulating sheared amphiphilic bilayers SA Shkulipa, WK den Otter, WJ Briels Biophysical journal 89 (2), 823-829, 2005 | 75 | 2005 |
| Kayaking and wagging of rods in shear flow YG Tao, WK den Otter, WJ Briels Physical review letters 95 (23), 237802, 2005 | 71 | 2005 |
| A new algorithm for dissipative particle dynamics WK den Otter, JHR Clarke Europhysics letters 53 (4), 426, 2001 | 71 | 2001 |
| Free energies of stable and metastable pores in lipid membranes under tension WK den Otter The Journal of chemical physics 131 (20), 11B614, 2009 | 66 | 2009 |
