| Ilastik: Interactive learning and segmentation toolkit C Sommer, C Straehle, U Koethe, FA Hamprecht 2011 IEEE international symposium on biomedical imaging: From nano to macro …, 2011 | 1453 | 2011 |
| Fluorogenic probes for live-cell imaging of the cytoskeleton G Lukinavičius, L Reymond, E D'este, A Masharina, F Göttfert, H Ta, ... Nature methods 11 (7), 731-733, 2014 | 979 | 2014 |
| Machine learning in cell biology–teaching computers to recognize phenotypes C Sommer, DW Gerlich Journal of cell science 126 (24), 5529-5539, 2013 | 424 | 2013 |
| Visualizing a homogeneous blend in bulk heterojunction polymer solar cells by analytical electron microscopy M Pfannmoller, H Flugge, G Benner, I Wacker, C Sommer, M Hanselmann, ... Nano letters 11 (8), 3099-3107, 2011 | 218 | 2011 |
| A practical guide to optimization in X10 expansion microscopy S Truckenbrodt, C Sommer, SO Rizzoli, JG Danzl Nature protocols 14 (3), 832-863, 2019 | 187 | 2019 |
| Automated detection and segmentation of synaptic contacts in nearly isotropic serial electron microscopy images A Kreshuk, CN Straehle, C Sommer, U Koethe, M Cantoni, G Knott, ... PloS one 6 (10), e24899, 2011 | 171 | 2011 |
| Learning-based mitotic cell detection in histopathological images C Sommer, L Fiaschi, FA Hamprecht, DW Gerlich Proceedings of the 21st International Conference on Pattern Recognition …, 2012 | 137 | 2012 |
| A deep learning and novelty detection framework for rapid phenotyping in high-content screening C Sommer, R Hoefler, M Samwer, DW Gerlich Molecular biology of the cell 28 (23), 3428-3436, 2017 | 110 | 2017 |
| CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories CE Villa, C Cheroni, CP Dotter, A López-Tóbon, B Oliveira, R Sacco, ... Cell reports 39 (1), 2022 | 91 | 2022 |
| Efficacy and mechanism of action of volasertib, a potent and selective inhibitor of Polo-like kinases, in preclinical models of acute myeloid leukemia D Rudolph, MA Impagnatiello, C Blaukopf, C Sommer, DW Gerlich, ... The Journal of pharmacology and experimental therapeutics 352 (3), 579-589, 2015 | 75 | 2015 |
| From experimental setup to bioinformatics: An RNAi screening platform to identify host factors involved in HIV‐1 replication K Börner, J Hermle, C Sommer, NP Brown, B Knapp, B Glass, J Kunkel, ... Biotechnology Journal 5 (1), 39-49, 2010 | 60 | 2010 |
| Impact of neoadjuvant chemotherapy on hypertrophy of the future liver remnant after associating liver partition and portal vein ligation for staged hepatectomy M Kremer, G Manzini, B Hristov, G Polychronidis, T Mokry, CM Sommer, ... Journal of the American College of Surgeons 221 (3), 717-728. e1, 2015 | 56 | 2015 |
| Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development J Morandell, LA Schwarz, B Basilico, S Tasciyan, G Dimchev, A Nicolas, ... Nature communications 12 (1), 3058, 2021 | 45 | 2021 |
| Learning of optimal illumination for material classification M Jehle, C Sommer, B Jähne Joint Pattern Recognition Symposium, 563-572, 2010 | 44 | 2010 |
| Automated segmentation of synapses in 3D EM data A Kreshuk, CN Straehle, C Sommer, U Koethe, G Knott, FA Hamprecht 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2011 | 40 | 2011 |
| Dense 4D nanoscale reconstruction of living brain tissue P Velicky, E Miguel, JM Michalska, J Lyudchik, D Wei, Z Lin, JF Watson, ... Nature Methods 20 (8), 1256-1265, 2023 | 38 | 2023 |
| Light-microscopy-based connectomic reconstruction of mammalian brain tissue MR Tavakoli, J Lyudchik, M Januszewski, V Vistunou, N Agudelo Dueñas, ... Nature, 1-13, 2025 | 37 | 2025 |
| Imaging brain tissue architecture across millimeter to nanometer scales JM Michalska, J Lyudchik, P Velicky, H Štefaničková, JF Watson, ... Nature Biotechnology 42 (7), 1051-1064, 2024 | 31 | 2024 |
| Neurotransmitter signaling regulates distinct phases of multimodal human interneuron migration S Bajaj, JA Bagley, C Sommer, A Vertesy, S Nagumo Wong, V Krenn, ... The EMBO Journal 40 (23), e108714, 2021 | 26 | 2021 |
| Semi-automated quantification of living cells with internalized nanostructures MB Margineanu, K Julfakyan, C Sommer, JE Perez, MF Contreras, ... Journal of nanobiotechnology 14 (1), 4, 2016 | 25 | 2016 |