WO2006086111A3 - Reagents for the detection of protein phosphorylation in leukemia signaling pathways - Google Patents
Reagents for the detection of protein phosphorylation in leukemia signaling pathways Download PDFInfo
- Publication number
- WO2006086111A3 WO2006086111A3 PCT/US2006/000979 US2006000979W WO2006086111A3 WO 2006086111 A3 WO2006086111 A3 WO 2006086111A3 US 2006000979 W US2006000979 W US 2006000979W WO 2006086111 A3 WO2006086111 A3 WO 2006086111A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- proteins
- protein
- reagents
- kinases
- phosphorylation
- Prior art date
Links
- 239000003153 chemical reaction reagent Substances 0.000 title abstract 2
- 238000001514 detection method Methods 0.000 title abstract 2
- 208000032839 leukemia Diseases 0.000 title abstract 2
- 230000019491 signal transduction Effects 0.000 title abstract 2
- 230000009822 protein phosphorylation Effects 0.000 title 1
- 108090000623 proteins and genes Proteins 0.000 abstract 5
- 102000004169 proteins and genes Human genes 0.000 abstract 5
- 230000026731 phosphorylation Effects 0.000 abstract 2
- 238000006366 phosphorylation reaction Methods 0.000 abstract 2
- 102000004196 processed proteins & peptides Human genes 0.000 abstract 2
- 108090000765 processed proteins & peptides Proteins 0.000 abstract 2
- 101710167800 Capsid assembly scaffolding protein Proteins 0.000 abstract 1
- 108010078791 Carrier Proteins Proteins 0.000 abstract 1
- 102000010831 Cytoskeletal Proteins Human genes 0.000 abstract 1
- 108010037414 Cytoskeletal Proteins Proteins 0.000 abstract 1
- 230000033616 DNA repair Effects 0.000 abstract 1
- 102100030011 Endoribonuclease Human genes 0.000 abstract 1
- 101710199605 Endoribonuclease Proteins 0.000 abstract 1
- 102000004190 Enzymes Human genes 0.000 abstract 1
- 108090000790 Enzymes Proteins 0.000 abstract 1
- 108091006027 G proteins Proteins 0.000 abstract 1
- 102000030782 GTP binding Human genes 0.000 abstract 1
- 108091000058 GTP-Binding Proteins 0.000 abstract 1
- 102000018898 GTPase-Activating Proteins Human genes 0.000 abstract 1
- 108010027920 GTPase-Activating Proteins Proteins 0.000 abstract 1
- 102000016285 Guanine Nucleotide Exchange Factors Human genes 0.000 abstract 1
- 108010067218 Guanine Nucleotide Exchange Factors Proteins 0.000 abstract 1
- 108060003951 Immunoglobulin Proteins 0.000 abstract 1
- 108091093105 Nuclear DNA Proteins 0.000 abstract 1
- 102000045595 Phosphoprotein Phosphatases Human genes 0.000 abstract 1
- 101710130420 Probable capsid assembly scaffolding protein Proteins 0.000 abstract 1
- 102000001253 Protein Kinase Human genes 0.000 abstract 1
- 102000004022 Protein-Tyrosine Kinases Human genes 0.000 abstract 1
- 108090000412 Protein-Tyrosine Kinases Proteins 0.000 abstract 1
- 230000004570 RNA-binding Effects 0.000 abstract 1
- 101710204410 Scaffold protein Proteins 0.000 abstract 1
- 101710113029 Serine/threonine-protein kinase Proteins 0.000 abstract 1
- 101710098414 Tyrosine-protein phosphatase Proteins 0.000 abstract 1
- 108091005764 adaptor proteins Proteins 0.000 abstract 1
- 230000019522 cellular metabolic process Effects 0.000 abstract 1
- 102000018358 immunoglobulin Human genes 0.000 abstract 1
- 108091006086 inhibitor proteins Proteins 0.000 abstract 1
- 150000002632 lipids Chemical class 0.000 abstract 1
- 238000000034 method Methods 0.000 abstract 1
- 230000037361 pathway Effects 0.000 abstract 1
- 108060006633 protein kinase Proteins 0.000 abstract 1
- 238000011002 quantification Methods 0.000 abstract 1
- 238000013518 transcription Methods 0.000 abstract 1
- 230000035897 transcription Effects 0.000 abstract 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/574—Immunoassay; Biospecific binding assay; Materials therefor for cancer
- G01N33/57407—Specifically defined cancers
- G01N33/57426—Specifically defined cancers leukemia
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
- C07K14/47—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/40—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against enzymes
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/44—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material not provided for elsewhere, e.g. haptens, metals, DNA, RNA, amino acids
Landscapes
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Molecular Biology (AREA)
- Immunology (AREA)
- Medicinal Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biophysics (AREA)
- Hematology (AREA)
- Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Urology & Nephrology (AREA)
- Oncology (AREA)
- Biotechnology (AREA)
- Cell Biology (AREA)
- Microbiology (AREA)
- Hospice & Palliative Care (AREA)
- Food Science & Technology (AREA)
- Physics & Mathematics (AREA)
- Analytical Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Toxicology (AREA)
- Zoology (AREA)
- Gastroenterology & Hepatology (AREA)
- Peptides Or Proteins (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
The invention discloses 424 novel phosphorylation sites identified in signal transduction proteins and pathways underlying human Leukemia, and provides phosphorylation-site specific antibodies and heavy-isotope labeled peptides (AQUA peptides) for the selective detection and quantification of these phosphorylated sites/proteins, as well as methods of using the reagents for such purpose. Among the phosphorylation sites identified are sites occurring in the following protein types: Adaptor/Scaffold proteins, Cytoskeletal proteins, Cellular Metabolism enzymes, G Protein/GTPase Activating/Guanine Nucleotide Exchange Factor proteins, Immunoglobulin Superfamily proteins, Inhibitor proteins, Lipid Kinases, Nuclear DNA Repair/RNA Binding/Transcription proteins, Serine/Threonine Protein Kinases, Tyrosine Kinases, Protein Phosphatases, and Translation/Transporter proteins.
Priority Applications (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| EP06718094A EP2126580A4 (en) | 2005-02-10 | 2006-01-12 | Reagents for the detection of protein phosphorylation in leukemia signaling pathways |
| US11/973,019 US20090142777A1 (en) | 2006-01-12 | 2007-10-05 | Reagents for the detection of protein phosphorylation in leukemia signaling pathways |
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US65158305P | 2005-02-10 | 2005-02-10 | |
| US60/651,583 | 2005-02-10 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| WO2006086111A2 WO2006086111A2 (en) | 2006-08-17 |
| WO2006086111A3 true WO2006086111A3 (en) | 2009-04-16 |
Family
ID=36793552
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/US2006/000979 WO2006086111A2 (en) | 2005-02-10 | 2006-01-12 | Reagents for the detection of protein phosphorylation in leukemia signaling pathways |
Country Status (2)
| Country | Link |
|---|---|
| EP (1) | EP2126580A4 (en) |
| WO (1) | WO2006086111A2 (en) |
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8227202B2 (en) | 2008-07-10 | 2012-07-24 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US8273544B2 (en) | 2008-07-10 | 2012-09-25 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US9182385B2 (en) | 2007-08-21 | 2015-11-10 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
Families Citing this family (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2006320699A1 (en) * | 2005-12-01 | 2007-06-07 | New York Blood Center, Inc. | Peptide inhibitors of ABL kinases |
| WO2008153636A1 (en) * | 2007-05-04 | 2008-12-18 | Cellsignaling Technology, Inc. | Phospho-specific antibodies to p13k regulatory subunit and uses thereof |
| CN103038248B (en) | 2010-05-31 | 2016-08-10 | 伦敦健康科学研究中心有限公司 | RHAMM binding peptide |
| DE102010033575B4 (en) * | 2010-08-02 | 2016-01-14 | Eberhard-Karls-Universität Tübingen Universitätsklinikum | ASPP2 splice variant |
| GB201322574D0 (en) * | 2013-12-19 | 2014-02-05 | Equigerminal Sa | Retroviral peptides |
| EP3877411A4 (en) * | 2018-11-05 | 2022-09-28 | The Brigham and Women's Hospital, Inc. | Nedd9 in pulmonary vascular thromboembolic disease |
Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4599305A (en) * | 1984-07-16 | 1986-07-08 | The Regents Of The University Of California | Method and composition for detection of human chronic myelogenous leukemia |
| US5667981A (en) * | 1994-05-13 | 1997-09-16 | Childrens Hospital Of Los Angeles | Diagnostics and treatments for cancers expressing tyrosine phosphorylated CRKL protein |
Family Cites Families (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US7183385B2 (en) * | 2002-02-20 | 2007-02-27 | Cell Signaling Technology, Inc. | Phospho-specific antibodies to Flt3 and uses thereof |
-
2006
- 2006-01-12 WO PCT/US2006/000979 patent/WO2006086111A2/en active Application Filing
- 2006-01-12 EP EP06718094A patent/EP2126580A4/en not_active Withdrawn
Patent Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4599305A (en) * | 1984-07-16 | 1986-07-08 | The Regents Of The University Of California | Method and composition for detection of human chronic myelogenous leukemia |
| US5667981A (en) * | 1994-05-13 | 1997-09-16 | Childrens Hospital Of Los Angeles | Diagnostics and treatments for cancers expressing tyrosine phosphorylated CRKL protein |
Non-Patent Citations (1)
| Title |
|---|
| See also references of EP2126580A4 * |
Cited By (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US9182385B2 (en) | 2007-08-21 | 2015-11-10 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US8227202B2 (en) | 2008-07-10 | 2012-07-24 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US8273544B2 (en) | 2008-07-10 | 2012-09-25 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US8399206B2 (en) | 2008-07-10 | 2013-03-19 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US8778620B2 (en) | 2008-07-10 | 2014-07-15 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
| US9500655B2 (en) | 2008-07-10 | 2016-11-22 | Nodality, Inc. | Methods for diagnosis, prognosis and methods of treatment |
Also Published As
| Publication number | Publication date |
|---|---|
| EP2126580A2 (en) | 2009-12-02 |
| EP2126580A4 (en) | 2010-11-10 |
| WO2006086111A2 (en) | 2006-08-17 |
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