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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 343 149

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 22 13

Repositories

Showing 10 of 388 repositories
  • IPNWB Public
    AllenInstitute/IPNWB’s past year of commit activity
    IGOR Pro 1 BSD-3-Clause 0 5 0 Updated Sep 29, 2024
  • axonal_connectomics Public

    Repository for tools developed for axonal connectomics

    AllenInstitute/axonal_connectomics’s past year of commit activity
    Jupyter Notebook 2 0 3 0 Updated Sep 29, 2024
  • npc_sessions Public

    Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.

    AllenInstitute/npc_sessions’s past year of commit activity
    Python 1 1 54 (3 issues need help) 1 Updated Sep 28, 2024
  • npc_sessions_cache Public

    Scripts, notebooks and plots that operate on NWB or NWB-like objects from `npc_sessions` in the cloud.

    AllenInstitute/npc_sessions_cache’s past year of commit activity
    Python 0 0 0 0 Updated Sep 28, 2024
  • TEM_config Public
    AllenInstitute/TEM_config’s past year of commit activity
    0 0 1 0 Updated Sep 28, 2024
  • deep-neurographs Public

    Deep-Neurographs is a Python module that utilizes machine learning to detect and correct false splits in a predicted neuron segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 3 MIT 0 0 0 Updated Sep 28, 2024
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims’s past year of commit activity
    Python 0 MIT 0 6 1 Updated Sep 27, 2024
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 3 BSD-3-Clause 1 43 4 Updated Sep 27, 2024
  • EM_MC_paper_figures Public

    Notebooks for analyzing and generating figures for EM MC paper

    AllenInstitute/EM_MC_paper_figures’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 27, 2024
  • ET_connectivity Public

    Code used to analyze the connectivity of ET neurons in MICrONs dataset

    AllenInstitute/ET_connectivity’s past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Sep 27, 2024
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