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Copy pathpr-check.sh
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executable file
·142 lines (118 loc) · 3.31 KB
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#!/bin/bash
# Copyright 2016 Intel Corporation
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# Check readiness for pull request
set -e
if [ ! -f brainiak/__init__.py ]
then
echo "Run "$(basename "$0")" from the root of the BrainIAK repository"
exit 1
fi
basedir=$(pwd)
function create_virtualenv_venv {
virtualenv ../$1
}
function activate_virtualenv_venv {
source ../$1/bin/activate
}
function deactivate_virtualenv_venv {
deactivate
}
function remove_virtualenv_venv {
rm -r ../$1
}
function create_conda_venv {
conda create -n $1 --yes python=3
}
function activate_conda_venv {
source activate $1
# Anaconda does not provide pip3 (at least on our Jenkins machine,
# Metacortex), so we install it in the virtual environment.
pip install -I pip
}
function deactivate_conda_venv {
source deactivate
}
function remove_conda_venv {
conda env remove -n $1 --yes
}
function exit_with_error {
echo $1 >&2
exit 1
}
function exit_with_error_and_venv {
$deactivate_venv
cd $basedir
rm -f .coverage.*
$remove_venv $venv
exit_with_error "$1"
}
if [ $(which conda) ]
then
export PYTHONNOUSERSITE=True
create_venv=create_conda_venv
activate_venv=activate_conda_venv
deactivate_venv=deactivate_conda_venv
remove_venv=remove_conda_venv
ignore_installed="--ignore-installed"
elif [ $(which virtualenv) ]
then
create_venv=create_virtualenv_venv
activate_venv=activate_virtualenv_venv
deactivate_venv=deactivate_virtualenv_venv
remove_venv=remove_virtualenv_venv
else
echo "Cannot find virtualenv or conda."
echo "You must install one of them or test manually."
exit 1
fi
# optional, but highly recommended: create a virtualenv to isolate tests
venv=$(mktemp -u brainiak_pr_venv_XXXXX) || \
exit_with_error "mktemp -u error"
$create_venv $venv || {
exit_with_error "virtualenv creation failed"
}
$activate_venv $venv || {
$remove_venv $venv
exit_with_error "virtualenv activation failed"
}
# install brainiak in editable mode (required for testing)
pip3 install $ignore_installed -U -e . || \
exit_with_error_and_venv "pip3 failed to install BrainIAK"
# install developer dependencies
pip3 install $ignore_installed -U -r requirements-dev.txt || \
exit_with_error_and_venv "pip3 failed to install requirements"
# static analysis
./run-checks.sh || \
exit_with_error_and_venv "run-checks failed"
# run tests
./run-tests.sh || \
exit_with_error_and_venv "run-tests failed"
# build documentation
cd docs
export THEANO_FLAGS='device=cpu,floatX=float64'
git clean -Xf .
if [ ! -z $SLURM_NODELIST ]
then
make_wrapper="srun -n 1"
fi
$make_wrapper make || {
cd -
exit_with_error_and_venv "make docs failed"
}
cd -
# optional: remove virtualenv
$deactivate_venv
$remove_venv $venv
echo "Check successful"