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Copy path.gitpod.yml
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50 lines (43 loc) · 2.07 KB
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workspaceLocation: gitpod/gitpod-ws.code-workspace
checkoutLocation: gitpod
github:
prebuilds:
# enable for the master/default branch (defaults to true)
master: true
# enable for all branches in this repo (defaults to false)
branches: false
# enable for pull requests coming from this repo (defaults to true)
pullRequests: true
# enable for pull requests coming from forks (defaults to false)
pullRequestsFromForks: true
# add a "Review in Gitpod" button as a comment to pull requests (defaults to true)
addComment: true
# add a "Review in Gitpod" button to pull requests (defaults to false)
addBadge: false
# See .github/Dockerfile
image: ghcr.io/nextflow-io/training:latest
tasks:
- before: printf 'unset JAVA_TOOL_OPTIONS\n' >> $HOME/.bashrc && exit
- name: Start web server
command: gp ports await 23000 && gp preview https://training.nextflow.io/hello_nextflow
- name: Load Nextflow Tutorial
command: docker pull -q nextflow/rnaseq-nf
- name: Start Nextflow Tutorial
command: |
cd hello-nextflow
source $HOME/.bashrc
export PS1='\[\e[3;36m\]${PWD/*\//} ->\[\e[0m\] '
unset JAVA_TOOL_OPTIONS
clear
vscode:
extensions: # based on nf-core.nf-core-extensionpack
- codezombiech.gitignore # Language support for .gitignore files
- cssho.vscode-svgviewer # SVG viewer
- esbenp.prettier-vscode # Markdown/CommonMark linting and style checking for Visual Studio Code
- EditorConfig.EditorConfig # override user/workspace settings with settings found in .editorconfig files
- Gruntfuggly.todo-tree # Display TODO and FIXME in a tree view in the activity bar
# - mechatroner.rainbow-csv # Highlight columns in csv files in different colors
- nextflow.nextflow # Nextflow syntax highlighting
# - oderwat.indent-rainbow # Highlight indentation level
- streetsidesoftware.code-spell-checker # Spelling checker for source code
- ms-vscode.live-server