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Commits

Commits on Nov 7, 2023
- Fix off-by-one error between QA launcher and QA Gatherer
  DrYak
  committed
  64bc2f9
Commits on Oct 26, 2023
- Switching to slurm
  DrYak
  committed
  27f105a
- Version bump V-pipe to v3.0.0.pre0
  DrYak
  committed
  e4051e4
- Cluster Tweaks
  DrYak
  committed
  641c337
- Patch: handle projects, too
  DrYak
  committed
  83467d6
- Cowabunga:
  DrYak
  committed
  554b0ed
- Protocol: v5.3.2
  DrYak
  committed
  9f3a339
Commits on May 9, 2023
- Sunsetting S3C
  DrYak
  committed
  1c819ee
- New master student
  DrYak
  committed
  73213bb
- V-pipe update
  DrYak
  committed
  63c78da
Commits on Apr 19, 2023
- Fixing Regex
  DrYak
  committed
  6bb726f
Commits on Apr 17, 2023
- Configurations update
  DrYak
  committed
  8228e25
- Skip more logs in gitignore
  DrYak
  committed
  622e3e0
- Tweaks in catchup
  
  mcarrara
  authored and
  Beerenwinkel TechnicalIdentity
  committed
  feb06bf
- Microsynth joined wastewater
  DrYak
  committed
  812a6c4
- Profile tweaks
  DrYak
  committed
  e2a2669
Commits on Feb 1, 2023
- Profiles update
  DrYak
  committed
  0d05e17
Commits on Jan 23, 2023
- Now also delete trimmed BAM
  
  mcarrara
  authored and
  DrYak
  committed
  29306ed
Commits on Dec 1, 2022
- expanded carillon regex for USB samples
  
  mcarrara
  authored and
  DrYak
  committed
  0b3c128
Commits on Nov 24, 2022
- Cowabunga: collect cooc
  DrYak
  committed
  9d11d26
- Patch rename: manually specify patches
  DrYak
  committed
  6661412
- Option to enforce fetching individual libkit per samples
  
  uweschmitt
  authored and
  local bs-pangolin user
  committed
  a271a25
Commits on Nov 10, 2022
- adapting to new json, run name and sample ID structure
  mcarrara
  committed
  0c8e320
Commits on Nov 6, 2022
- New 4.1 protocol
  DrYak
  committed
  8e628f8
- Rsync jobs for students
  DrYak
  committed
  329d7c8
Commits on Oct 30, 2022
- automatically add samples.wastewateronly.tsv
  DrYak
  committed
  4b3add0
Commits on Oct 28, 2022
- Wastewater tool improvement
  DrYak
  committed
  96df16b
- Bumps (smgu, etc.)
  DrYak
  committed
  8747ff4
Commits on Oct 11, 2022
- Profiles and batches
  DrYak
  committed
  7b5f92c
- Moving wastewater cooc-urenge toward V-pipe
  DrYak
  committed
  23e5897
- Remove MKPX from samples
  DrYak
  committed
  30632c7
Commits on Oct 8, 2022
- More profile adaptation
  DrYak
  committed
  2097dd2
Commits on Oct 6, 2022
- Slurmification + Profiles
  DrYak
  committed
  3117a49
- Tool to double check if number of reads match
  DrYak
  committed
  3147831
Commits on Oct 5, 2022
- Now with primers trimming
  DrYak
  committed
  6159461

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Commits on Nov 7, 2023

Commits on Oct 26, 2023

Commits on May 9, 2023

Commits on Apr 19, 2023

Commits on Apr 17, 2023

Commits on Feb 1, 2023

Commits on Jan 23, 2023

Commits on Dec 1, 2022

Commits on Nov 24, 2022

Commits on Nov 10, 2022

Commits on Nov 6, 2022

Commits on Oct 30, 2022

Commits on Oct 28, 2022

Commits on Oct 11, 2022

Commits on Oct 8, 2022

Commits on Oct 6, 2022

Commits on Oct 5, 2022